PETSc

Prerequisites

  1. Install openmpi. See this page for more info.

    • – Note: on the mac, you can’t use the prebuilt openmpi binaries because they do not include fortran support; you’ll need to install from source

Compilation

  1. Download PETSc 3.0 from here

  2. Extract archive (tar -xzvf petsc…)
     export PETSC_DIR=$PWD
    ./config/configure.py --with-petsc4py=1 --download-petsc4py=yes --prefix=/usr/local --with-shared  --with-superul_dist=1 --download-superlu_dist=yes --with-parmetis=1 --download-parmetis=yes  --with-superlu=1 --download-superlu=yes 
     PETSC_ARCH=linux-gnu-c-debug; export PETSC_ARCH
     #PETSC_ARCH=darwin9.7.0-c-debug; export PETSC_ARCH #on the mac
     make all
     make test

Installation

  •  sudo su
     export PETSC_DIR=$PWD
     PETSC_ARCH=linux-gnu-c-debug; export PETSC_ARCH
     make install

Post Install

  • Add the following to ~/.bashrc
     PETSC_DIR=/usr/local; export PETSC_DIR
     PETSC_ARCH=linux-gnu-c-debug; export PETSC_ARCH

Install petsc4py

  1. see Installation Notes