Continuity 6 Files

Previously known as “.pickle” files, .cont6 files contain serialized objects for the various parts of the problem.

Overview

• Model
  • Mesh
    • Mesh
    • Imaging
    • Fitting
  • Properties
    • Biomechanics
    • Electrophysiology
  • External Conditions
    • Biomechanics
    • Electrophysiology
  • Misc

Mesh

• Mesh

  • coord –> coord

  • dims –> dims

  • elem –> elem

  • nodes –> nodes

  • basis –> basis (gui_basis)

• Fitting

  • data –> data (gui_data)

  • fit –> fit (gui_fit)

  • fit_constraints –> fit_constraints

• Imaging

  • images –> images (gui_images)

  • vertCoords –> vertCoords (gui_vertCoords)

Properties

• Biomechanics

  • circModel –> circModel (gui_circModel)

  • equ –> equ (gui_biomechanics_equ)

  • mat –> mat (gui_biomechanics_mat)

  • volume –> volume (gui_volume)

  • active –> active (gui_active)

• Electrophysiology

  • epEquations –> epEquations (epEquations)

  • solvers –> solvers (gui_electrophys_solvers) [SOON TO BE OBSOLETE]

  • stim –> stim (gui_electrophys_stim) [SOON TO BE OBSOLETE]

External Conditions

• Biomechanics

  • init –> init

• Electrophysiology
  • ?

Misc

• divisions –> divisions (gui_divisions)

• bgcolor –>

• light –>

• renderer –>

• sender –>

• dims –> dims

Obsolete

• nonlinResult

Unknown (Probably Obsolete)

• sol –> sol (gui_biomechanics_sol)

• dataFiber –>

• dataField –>

• renElements –>

• renNodes –>

• rootobj –>

• strains
• stress
• gui_solutions
• gui_equ
• gui_initials
• gui_materials

Scanning a Cont6 file

   1 for d in dir(self.stored_data):
   2         a = getattr(self.stored_data, d)
   3         if hasattr(a, "handle"):
   4                 print d,"-->", a.handle,
   5                 try:
   6                         print '(%s)'%a.obj['info']
   7                 except:
   8                         print ""